WormMine

WSWS298

An integrated data resource for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:T12C9.5a.1 Sequence Name  T12C9.5a.1
Length (nt)  1136   Chromosome Location  II: 4433393-4435169
Chromosome . Primary Identifier  II Chromosome Location . Start  4433393
Chromosome Location . End  4435169 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
T12C9.5a.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00003699 nhr-109 T12C9.5 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:T12C9.5a T12C9.5a 915   II: 4433864-4434220

1 Chromosome

WormBase ID Organism Length (nt)
II Caenorhabditis elegans 15279421  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
Transcript:T12C9.5a.1 4433393 4435169 1

2 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  

5 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon47624   102   II: 4433393-4433494 Caenorhabditis elegans
Exon47630   86   II: 4433535-4433620 Caenorhabditis elegans
Exon47633   368   II: 4433853-4434220 Caenorhabditis elegans
Exon47638   185   II: 4434539-4434723 Caenorhabditis elegans
Exon47647   395   II: 4434775-4435169 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier 		Start End Strand
Transcript:T12C9.5a.1 4433393 4435169 1

1 Sequence

Length
1136

1 Sequence Ontology Term

Identifier Name Description
transcript