WormMine

WSWS298

An integrated data resource for C. elegans and related nematodes

CDS :

WormMine ID  CDS:F54D12.6a Sequence Name  F54D12.6a
Length (nt)  1800   Chromosome Location  II: 1369046-1369145
Chromosome . Primary Identifier  II Chromosome Location . Start  1369046
Chromosome Location . End  1369145
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F54D12.6a

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE45646 ROG-1, isoform a 65.3 599 Caenorhabditis elegans
 

Other

10 RNAi

WormBase ID
WBRNAi00048304
WBRNAi00085589
WBRNAi00082877
WBRNAi00048303
WBRNAi00066029
WBRNAi00032786
WBRNAi00066027
WBRNAi00066028
WBRNAi00082876
WBRNAi00086023

1 Chromosome

WormBase ID Organism Length (nt)
II Caenorhabditis elegans 15279421  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
CDS:F54D12.6a 1369046 1369145 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00018819 rog-1 F54D12.6 Caenorhabditis elegans

9 Locations


Feature . Primary Identifier
Start End Strand
CDS:F54D12.6a 1369046 1369145 -1
CDS:F54D12.6a 1369816 1370099 -1
CDS:F54D12.6a 1371521 1371986 -1
CDS:F54D12.6a 1372457 1372621 -1
CDS:F54D12.6a 1372921 1373059 -1
CDS:F54D12.6a 1373266 1373415 -1
CDS:F54D12.6a 1373781 1373925 -1
CDS:F54D12.6a 1374404 1374597 -1
CDS:F54D12.6a 1374829 1374985 -1

1 Sequence

Length
1800

1 Sequence Ontology Term

Identifier Name Description
CDS  

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:F54D12.6a.1 F54D12.6a.1 2746   II: 1368103-1374988