WormMine

WSWS298

An integrated data resource for C. elegans and related nematodes

CDS :

WormMine ID  CDS:T27A3.1a Sequence Name  T27A3.1a
Length (nt)  1707   Chromosome Location  I: 6123150-6123245
Chromosome . Primary Identifier  I Chromosome Location . Start  6123150
Chromosome Location . End  6123245
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
T27A3.1a

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE53790 TRAK-1, isoform a 63.4 568 Caenorhabditis elegans
 

Other

8 RNAi

WormBase ID
WBRNAi00106793
WBRNAi00106794
WBRNAi00000337
WBRNAi00002415
WBRNAi00054259
WBRNAi00004314
WBRNAi00117097
WBRNAi00075803

1 Chromosome

WormBase ID Organism Length (nt)
I Caenorhabditis elegans 15072434  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
CDS:T27A3.1a 6123150 6123245 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00020838 trak-1 T27A3.1 Caenorhabditis elegans

13 Locations


Feature . Primary Identifier
Start End Strand
CDS:T27A3.1a 6123150 6123245 1
CDS:T27A3.1a 6123413 6123486 1
CDS:T27A3.1a 6123646 6123771 1
CDS:T27A3.1a 6123947 6124006 1
CDS:T27A3.1a 6124338 6124557 1
CDS:T27A3.1a 6124608 6124779 1
CDS:T27A3.1a 6124828 6125006 1
CDS:T27A3.1a 6125053 6125223 1
CDS:T27A3.1a 6125270 6125390 1
CDS:T27A3.1a 6125445 6125593 1
CDS:T27A3.1a 6125645 6125719 1
CDS:T27A3.1a 6125904 6126044 1
CDS:T27A3.1a 6126410 6126532 1

1 Sequence

Length
1707

1 Sequence Ontology Term

Identifier Name Description
CDS  

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:T27A3.1a.1 T27A3.1a.1 2062   I: 6123122-6126859