WormMine

WSWS298

An integrated data resource for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:T27A3.1a.1 Sequence Name  T27A3.1a.1
Length (nt)  2062   Chromosome Location  I: 6123122-6126859
Chromosome . Primary Identifier  I Chromosome Location . Start  6123122
Chromosome Location . End  6126859 Method  Coding_transcript
Quick Links:
 
Quick Links:
 

1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
T27A3.1a.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00020838 trak-1 T27A3.1 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:T27A3.1a T27A3.1a 1707   I: 6123150-6123245

1 Chromosome

WormBase ID Organism Length (nt)
I Caenorhabditis elegans 15072434  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:T27A3.1a.1 6123122 6126859 1

2 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  

13 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon15085   124   I: 6123122-6123245 Caenorhabditis elegans
Exon15087   74   I: 6123413-6123486 Caenorhabditis elegans
Exon15090   126   I: 6123646-6123771 Caenorhabditis elegans
Exon15093   60   I: 6123947-6124006 Caenorhabditis elegans
Exon15096   220   I: 6124338-6124557 Caenorhabditis elegans
Exon15099   172   I: 6124608-6124779 Caenorhabditis elegans
Exon15102   179   I: 6124828-6125006 Caenorhabditis elegans
Exon15105   171   I: 6125053-6125223 Caenorhabditis elegans
Exon15108   121   I: 6125270-6125390 Caenorhabditis elegans
Exon15111   149   I: 6125445-6125593 Caenorhabditis elegans
Exon15115   75   I: 6125645-6125719 Caenorhabditis elegans
Exon15117   141   I: 6125904-6126044 Caenorhabditis elegans
Exon15121   450   I: 6126410-6126859 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:T27A3.1a.1 6123122 6126859 1

1 Sequence

Length
2062

1 Sequence Ontology Term

Identifier Name Description
transcript