WormMine

WSWS298

An integrated data resource for C. elegans and related nematodes

CDS :

WormMine ID  CDS:F59A3.6a Sequence Name  F59A3.6a
Length (nt)  882   Chromosome Location  I: 5510454-5510642
Chromosome . Primary Identifier  I Chromosome Location . Start  5510454
Chromosome Location . End  5510642
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F59A3.6a

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE11426 RPA-4, isoform a 33.1 293 Caenorhabditis elegans
 

Other

4 RNAi

WormBase ID
WBRNAi00049104
WBRNAi00049105
WBRNAi00003857
WBRNAi00003858

1 Chromosome

WormBase ID Organism Length (nt)
I Caenorhabditis elegans 15072434  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
CDS:F59A3.6a 5510454 5510642 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00019079 rpa-4 F59A3.6 Caenorhabditis elegans

8 Locations


Feature . Primary Identifier 		Start End Strand
CDS:F59A3.6a 5510454 5510642 -1
CDS:F59A3.6a 5510693 5510782 -1
CDS:F59A3.6a 5510834 5510938 -1
CDS:F59A3.6a 5510981 5511075 -1
CDS:F59A3.6a 5511121 5511211 -1
CDS:F59A3.6a 5511259 5511378 -1
CDS:F59A3.6a 5511429 5511551 -1
CDS:F59A3.6a 5511601 5511669 -1

1 Sequence

Length
882

1 Sequence Ontology Term

Identifier Name Description
CDS  

4 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:F59A3.6a.1 F59A3.6a.1 1743   I: 5509467-5511689
Transcript:F59A3.6a.2 F59A3.6a.2 1698   I: 5509470-5511689
Transcript:F59A3.6a.3 F59A3.6a.3 1543   I: 5509509-5511689
Transcript:F59A3.6a.4 F59A3.6a.4 1230   I: 5510037-5511689