WormMine

WSWS298

An integrated data resource for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F59A3.6a.1 Sequence Name  F59A3.6a.1
Length (nt)  1743   Chromosome Location  I: 5509467-5511689
Chromosome . Primary Identifier  I Chromosome Location . Start  5509467
Chromosome Location . End  5511689 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F59A3.6a.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00019079 rpa-4 F59A3.6 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F59A3.6a F59A3.6a 882   I: 5510454-5510642

1 Chromosome

WormBase ID Organism Length (nt)
I Caenorhabditis elegans 15072434  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
Transcript:F59A3.6a.1 5509467 5511689 -1

2 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  

11 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon13053   298   I: 5509467-5509764 Caenorhabditis elegans
Exon13059   90   I: 5509815-5509904 Caenorhabditis elegans
Exon13070   242   I: 5509956-5510197 Caenorhabditis elegans
Exon13079   400   I: 5510243-5510642 Caenorhabditis elegans
Exon13086   90   I: 5510693-5510782 Caenorhabditis elegans
Exon13094   105   I: 5510834-5510938 Caenorhabditis elegans
Exon13100   95   I: 5510981-5511075 Caenorhabditis elegans
Exon13107   91   I: 5511121-5511211 Caenorhabditis elegans
Exon13112   120   I: 5511259-5511378 Caenorhabditis elegans
Exon13117   123   I: 5511429-5511551 Caenorhabditis elegans
Exon13123   89   I: 5511601-5511689 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier 		Start End Strand
Transcript:F59A3.6a.1 5509467 5511689 -1

1 Sequence

Length
1743

1 Sequence Ontology Term

Identifier Name Description
transcript