WormMine

WSWS298

An integrated data resource for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:C09D1.1j.1 Sequence Name  C09D1.1j.1
Length (nt)  20907   Chromosome Location  I: 4047136-4090427
Chromosome . Primary Identifier  I Chromosome Location . Start  4047136
Chromosome Location . End  4090427 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C09D1.1j.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00006820 unc-89 C09D1.1 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:C09D1.1j C09D1.1j 20907   I: 4047136-4047214

1 Chromosome

WormBase ID Organism Length (nt)
I Caenorhabditis elegans 15072434  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
Transcript:C09D1.1j.1 4047136 4090427 1

2 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  

37 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon8439   79   I: 4047136-4047214 Caenorhabditis elegans
Exon8457   111   I: 4047965-4048075 Caenorhabditis elegans
Exon8471   227   I: 4048124-4048350 Caenorhabditis elegans
Exon8485   744   I: 4048906-4049649 Caenorhabditis elegans
Exon8499   69   I: 4049972-4050040 Caenorhabditis elegans
Exon8513   216   I: 4050093-4050308 Caenorhabditis elegans
Exon8527   188   I: 4051955-4052142 Caenorhabditis elegans
Exon8541   484   I: 4052456-4052939 Caenorhabditis elegans
Exon8555   186   I: 4053398-4053583 Caenorhabditis elegans
Exon8589   357   I: 4058536-4058892 Caenorhabditis elegans
Exon8603   1232   I: 4058979-4060210 Caenorhabditis elegans
Exon8618   1861   I: 4060266-4062126 Caenorhabditis elegans
Exon8631   157   I: 4062304-4062460 Caenorhabditis elegans
Exon8645   2160   I: 4062675-4064834 Caenorhabditis elegans
Exon8656   6065   I: 4064920-4070984 Caenorhabditis elegans
Exon8670   244   I: 4071035-4071278 Caenorhabditis elegans
Exon8684   330   I: 4071333-4071662 Caenorhabditis elegans
Exon8702   104   I: 4073538-4073641 Caenorhabditis elegans
Exon8716   275   I: 4075253-4075527 Caenorhabditis elegans
Exon8730   1085   I: 4075626-4076710 Caenorhabditis elegans
Exon8744   113   I: 4077177-4077289 Caenorhabditis elegans
Exon8758   169   I: 4077395-4077563 Caenorhabditis elegans
Exon8770   100   I: 4078024-4078123 Caenorhabditis elegans
Exon8785   192   I: 4079525-4079716 Caenorhabditis elegans
Exon8799   357   I: 4081936-4082292 Caenorhabditis elegans
Exon8811   265   I: 4082402-4082666 Caenorhabditis elegans
Exon8823   287   I: 4083014-4083300 Caenorhabditis elegans
Exon8835   122   I: 4083824-4083945 Caenorhabditis elegans
Exon8847   404   I: 4084065-4084468 Caenorhabditis elegans
Exon8859   201   I: 4085025-4085225 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier 		Start End Strand
Transcript:C09D1.1j.1 4047136 4090427 1

1 Sequence

Length
20907

1 Sequence Ontology Term

Identifier Name Description
transcript