WormMine

WSWS298

An integrated data resource for C. elegans and related nematodes

CDS :

WormMine ID  CDS:T12F5.5a Sequence Name  T12F5.5a
Length (nt)  2283   Chromosome Location  I: 3734429-3734566
Chromosome . Primary Identifier  I Chromosome Location . Start  3734429
Chromosome Location . End  3734566
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
T12F5.5a

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE34368 LARP-5, isoform a 84.3 760 Caenorhabditis elegans
 

Other

5 RNAi

WormBase ID
WBRNAi00053224
WBRNAi00004212
WBRNAi00102177
WBRNAi00035518
WBRNAi00116861

1 Chromosome

WormBase ID Organism Length (nt)
I Caenorhabditis elegans 15072434  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
CDS:T12F5.5a 3734429 3734566 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00004147 larp-5 T12F5.5 Caenorhabditis elegans

8 Locations


Feature . Primary Identifier 		Start End Strand
CDS:T12F5.5a 3734429 3734566 -1
CDS:T12F5.5a 3734627 3735919 -1
CDS:T12F5.5a 3736187 3736345 -1
CDS:T12F5.5a 3736396 3736496 -1
CDS:T12F5.5a 3736557 3736693 -1
CDS:T12F5.5a 3737290 3737478 -1
CDS:T12F5.5a 3738571 3738758 -1
CDS:T12F5.5a 3740257 3740334 -1

1 Sequence

Length
2283

1 Sequence Ontology Term

Identifier Name Description
CDS  

2 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:T12F5.5a.1 T12F5.5a.1 3367   I: 3732860-3740485
Transcript:T12F5.5a.2 T12F5.5a.2 3895   I: 3732966-3740483