WormMine

WSWS298

An integrated data resource for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:T12F5.5a.1 Sequence Name  T12F5.5a.1
Length (nt)  3367   Chromosome Location  I: 3732860-3740485
Chromosome . Primary Identifier  I Chromosome Location . Start  3732860
Chromosome Location . End  3740485 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
T12F5.5a.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00004147 larp-5 T12F5.5 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:T12F5.5a T12F5.5a 2283   I: 3734429-3734566

1 Chromosome

WormBase ID Organism Length (nt)
I Caenorhabditis elegans 15072434  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
Transcript:T12F5.5a.1 3732860 3740485 -1

2 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  

9 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon7594   844   I: 3732860-3733703 Caenorhabditis elegans
Exon7600   227   I: 3734340-3734566 Caenorhabditis elegans
Exon7605   1293   I: 3734627-3735919 Caenorhabditis elegans
Exon7611   159   I: 3736187-3736345 Caenorhabditis elegans
Exon7617   101   I: 3736396-3736496 Caenorhabditis elegans
Exon7623   137   I: 3736557-3736693 Caenorhabditis elegans
Exon7629   189   I: 3737290-3737478 Caenorhabditis elegans
Exon7635   188   I: 3738571-3738758 Caenorhabditis elegans
Exon7642   229   I: 3740257-3740485 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier 		Start End Strand
Transcript:T12F5.5a.1 3732860 3740485 -1

1 Sequence

Length
3367

1 Sequence Ontology Term

Identifier Name Description
transcript