WormMine

WSWS298

An integrated data resource for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:R09G11.2a.1 Sequence Name  R09G11.2a.1
Length (nt)  2554   Chromosome Location  X: 17519735-17528197
Chromosome . Primary Identifier  X Chromosome Location . Start  17519735
Chromosome Location . End  17528197 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
R09G11.2a.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00003600 nhr-1 R09G11.2 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:R09G11.2a R09G11.2a 1338   X: 17520017-17520206

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
Transcript:R09G11.2a.1 17519735 17528197 1

2 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  

11 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon266168   472   X: 17519735-17520206 Caenorhabditis elegans
Exon266174   88   X: 17520823-17520910 Caenorhabditis elegans
Exon266181   80   X: 17522225-17522304 Caenorhabditis elegans
Exon266187   66   X: 17522416-17522481 Caenorhabditis elegans
Exon266193   119   X: 17523475-17523593 Caenorhabditis elegans
Exon266199   147   X: 17523824-17523970 Caenorhabditis elegans
Exon266205   135   X: 17524020-17524154 Caenorhabditis elegans
Exon266211   129   X: 17526305-17526433 Caenorhabditis elegans
Exon266216   127   X: 17526482-17526608 Caenorhabditis elegans
Exon266221   155   X: 17526957-17527111 Caenorhabditis elegans
Exon266228   1036   X: 17527162-17528197 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier 		Start End Strand
Transcript:R09G11.2a.1 17519735 17528197 1

1 Sequence

Length
2554

1 Sequence Ontology Term

Identifier Name Description
transcript