WormMine

WSWS298

An integrated data resource for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:ZK54.2b.1 Sequence Name  ZK54.2b.1
Length (nt)  3885   Chromosome Location  X: 17467475-17473698
Chromosome . Primary Identifier  X Chromosome Location . Start  17467475
Chromosome Location . End  17473698 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
ZK54.2b.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00006602 tps-1 ZK54.2 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:ZK54.2b ZK54.2b 3885   X: 17467475-17467687

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
Transcript:ZK54.2b.1 17467475 17473698 -1

2 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  

20 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon266110   213   X: 17467475-17467687 Caenorhabditis elegans
Exon266112   204   X: 17468018-17468221 Caenorhabditis elegans
Exon266114   234   X: 17468274-17468507 Caenorhabditis elegans
Exon266116   289   X: 17468554-17468842 Caenorhabditis elegans
Exon266118   110   X: 17468897-17469006 Caenorhabditis elegans
Exon266120   189   X: 17469053-17469241 Caenorhabditis elegans
Exon266122   129   X: 17469354-17469482 Caenorhabditis elegans
Exon266124   681   X: 17469535-17470215 Caenorhabditis elegans
Exon266126   111   X: 17470262-17470372 Caenorhabditis elegans
Exon266128   222   X: 17470584-17470805 Caenorhabditis elegans
Exon266130   156   X: 17470852-17471007 Caenorhabditis elegans
Exon266132   102   X: 17471053-17471154 Caenorhabditis elegans
Exon266134   79   X: 17471205-17471283 Caenorhabditis elegans
Exon266136   128   X: 17471630-17471757 Caenorhabditis elegans
Exon266138   180   X: 17471805-17471984 Caenorhabditis elegans
Exon266140   147   X: 17472029-17472175 Caenorhabditis elegans
Exon266142   222   X: 17472347-17472568 Caenorhabditis elegans
Exon266144   93   X: 17473107-17473199 Caenorhabditis elegans
Exon266146   339   X: 17473253-17473591 Caenorhabditis elegans
Exon266147   57   X: 17473642-17473698 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier 		Start End Strand
Transcript:ZK54.2b.1 17467475 17473698 -1

1 Sequence

Length
3885

1 Sequence Ontology Term

Identifier Name Description
transcript