WormMine

WSWS298

An integrated data resource for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F11C7.3.1 Sequence Name  F11C7.3.1
Length (nt)  1425   Chromosome Location  X: 17393939-17396556
Chromosome . Primary Identifier  X Chromosome Location . Start  17393939
Chromosome Location . End  17396556 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F11C7.3.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00006886 vap-1 F11C7.3 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F11C7.3 F11C7.3 1275   X: 17393991-17394105

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
Transcript:F11C7.3.1 17393939 17396556 -1

2 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  

8 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon265956   167   X: 17393939-17394105 Caenorhabditis elegans
Exon265957   188   X: 17394438-17394625 Caenorhabditis elegans
Exon265958   150   X: 17394675-17394824 Caenorhabditis elegans
Exon265959   295   X: 17394871-17395165 Caenorhabditis elegans
Exon265960   86   X: 17395501-17395586 Caenorhabditis elegans
Exon265961   237   X: 17395634-17395870 Caenorhabditis elegans
Exon265962   146   X: 17395916-17396061 Caenorhabditis elegans
Exon265963   156   X: 17396401-17396556 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier 		Start End Strand
Transcript:F11C7.3.1 17393939 17396556 -1

1 Sequence

Length
1425

1 Sequence Ontology Term

Identifier Name Description
transcript