WormMine

WSWS298

An integrated data resource for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:C53C11.3.1 Sequence Name  C53C11.3.1
Length (nt)  3486   Chromosome Location  X: 17318584-17326558
Chromosome . Primary Identifier  X Chromosome Location . Start  17318584
Chromosome Location . End  17326558 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C53C11.3.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00004220 ptr-5 C53C11.3 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:C53C11.3 C53C11.3 2886   X: 17318635-17318643

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
Transcript:C53C11.3.1 17318584 17326558 1

2 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  

20 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon265827   60   X: 17318584-17318643 Caenorhabditis elegans
Exon265828   106   X: 17319077-17319182 Caenorhabditis elegans
Exon265829   119   X: 17319333-17319451 Caenorhabditis elegans
Exon265830   113   X: 17319506-17319618 Caenorhabditis elegans
Exon265831   114   X: 17320219-17320332 Caenorhabditis elegans
Exon265832   106   X: 17320423-17320528 Caenorhabditis elegans
Exon265833   222   X: 17320986-17321207 Caenorhabditis elegans
Exon265834   199   X: 17321258-17321456 Caenorhabditis elegans
Exon265835   82   X: 17321805-17321886 Caenorhabditis elegans
Exon265836   128   X: 17321937-17322064 Caenorhabditis elegans
Exon265837   174   X: 17322109-17322282 Caenorhabditis elegans
Exon265839   146   X: 17322631-17322776 Caenorhabditis elegans
Exon265840   548   X: 17323184-17323731 Caenorhabditis elegans
Exon265841   108   X: 17324140-17324247 Caenorhabditis elegans
Exon265842   85   X: 17324293-17324377 Caenorhabditis elegans
Exon265843   106   X: 17324427-17324532 Caenorhabditis elegans
Exon265844   119   X: 17324577-17324695 Caenorhabditis elegans
Exon265845   159   X: 17324906-17325064 Caenorhabditis elegans
Exon265846   72   X: 17325689-17325760 Caenorhabditis elegans
Exon265847   720   X: 17325839-17326558 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier 		Start End Strand
Transcript:C53C11.3.1 17318584 17326558 1

1 Sequence

Length
3486

1 Sequence Ontology Term

Identifier Name Description
transcript