WormMine

WSWS298

An integrated data resource for C. elegans and related nematodes

Gene :

WormBase Gene ID  ? WBGene00219737 Gene Name  linc-155
Sequence Name  ? T25G12.14 Organism  Caenorhabditis elegans
Automated Description  Is affected by alh-4 based on RNA-seq studies. Biotype  SO:0001641
Genetic Position  X :24.0868± Length (nt)  ? 2066
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
WBGene00219737

Genomics

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:T25G12.14 T25G12.14 714   X: 17240348-17242413
 

Other

0 CDSs

0 RNAi Result

23 Allele

Public Name
gk964260
gk962707
gk963810
gk963581
WBVar01929638
ttTi20584
ttTi25561
WBVar01680294
ttTi20589
gk640840
WBVar01900278
gk372328
gk438086
gk329299
gk816647
WBVar01822806
gk824072
gk487904
gk662069
WBVar01900277
gk484815
WBVar01914384
WBVar01911439

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
WBGene00219737 17240348 17242413 1

2 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  

1 Downstream Intergenic Region

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
intergenic_region_chrX_17242414..17243267   854 X: 17242414-17243267 Caenorhabditis elegans

1 Expression Clusters

Regulated By Treatment Description Algorithm Primary Identifier
  Transcripts that showed significantly increased expression in alh-4(hj221) deletion allele comparing to in N2. N.A. WBPaper00061653:alh-4(hj221)_upregulated

0 Expression Patterns

0 GO Annotation

0 Homologues

1 Locations


Feature . Primary Identifier 		Start End Strand
WBGene00219737 17240348 17242413 1

0 Ontology Annotations

0 Regulates Expr Cluster

1 Sequence

Length
2066

1 Sequence Ontology Term

Identifier Name Description
gene  

0 Strains

1 Upstream Intergenic Region

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
intergenic_region_chrX_17238862..17240347   1486 X: 17238862-17240347 Caenorhabditis elegans