WormMine

WSWS298

An integrated data resource for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:C08A9.3a.1 Sequence Name  C08A9.3a.1
Length (nt)  2155   Chromosome Location  X: 17087882-17093299
Chromosome . Primary Identifier  X Chromosome Location . Start  17087882
Chromosome Location . End  17093299 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C08A9.3a.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00015583 C08A9.3 C08A9.3 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:C08A9.3a C08A9.3a 2085   X: 17087882-17088290

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
Transcript:C08A9.3a.1 17087882 17093299 -1

2 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  

16 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon265539   409   X: 17087882-17088290 Caenorhabditis elegans
Exon265540   146   X: 17088336-17088481 Caenorhabditis elegans
Exon265542   102   X: 17088529-17088630 Caenorhabditis elegans
Exon265544   137   X: 17088682-17088818 Caenorhabditis elegans
Exon265546   362   X: 17089221-17089582 Caenorhabditis elegans
Exon265549   181   X: 17089625-17089805 Caenorhabditis elegans
Exon265551   69   X: 17089852-17089920 Caenorhabditis elegans
Exon265553   69   X: 17090058-17090126 Caenorhabditis elegans
Exon265555   76   X: 17090170-17090245 Caenorhabditis elegans
Exon265557   90   X: 17090293-17090382 Caenorhabditis elegans
Exon265559   91   X: 17090424-17090514 Caenorhabditis elegans
Exon265561   51   X: 17090963-17091013 Caenorhabditis elegans
Exon265563   89   X: 17091063-17091151 Caenorhabditis elegans
Exon265565   90   X: 17091199-17091288 Caenorhabditis elegans
Exon265567   99   X: 17091336-17091434 Caenorhabditis elegans
Exon265571   94   X: 17093206-17093299 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier 		Start End Strand
Transcript:C08A9.3a.1 17087882 17093299 -1

1 Sequence

Length
2155

1 Sequence Ontology Term

Identifier Name Description
transcript