WormMine

WSWS298

An integrated data resource for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F41G4.2a.1 Sequence Name  F41G4.2a.1
Length (nt)  4602   Chromosome Location  X: 16807455-16812708
Chromosome . Primary Identifier  X Chromosome Location . Start  16807455
Chromosome Location . End  16812708 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F41G4.2a.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00000294 cas-1 F41G4.2 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F41G4.2a F41G4.2a 3588   X: 16807677-16807757

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
Transcript:F41G4.2a.1 16807455 16812708 -1

2 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  

7 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon264850   303   X: 16807455-16807757 Caenorhabditis elegans
Exon264852   147   X: 16807803-16807949 Caenorhabditis elegans
Exon264854   207   X: 16808161-16808367 Caenorhabditis elegans
Exon264856   579   X: 16808432-16809010 Caenorhabditis elegans
Exon264858   222   X: 16809105-16809326 Caenorhabditis elegans
Exon264860   134   X: 16809465-16809598 Caenorhabditis elegans
Exon264862   3010   X: 16809699-16812708 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier 		Start End Strand
Transcript:F41G4.2a.1 16807455 16812708 -1

1 Sequence

Length
4602

1 Sequence Ontology Term

Identifier Name Description
transcript