WormMine

WSWS298

An integrated data resource for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F59C12.1a.1 Sequence Name  F59C12.1a.1
Length (nt)  2194   Chromosome Location  X: 16595238-16602232
Chromosome . Primary Identifier  X Chromosome Location . Start  16595238
Chromosome Location . End  16602232 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F59C12.1a.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00000401 cdh-9 F59C12.1 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F59C12.1a F59C12.1a 1872   X: 16595240-16595363

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
Transcript:F59C12.1a.1 16595238 16602232 1

2 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  

14 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon264473   126   X: 16595238-16595363 Caenorhabditis elegans
Exon264475   146   X: 16596126-16596271 Caenorhabditis elegans
Exon264477   66   X: 16597497-16597562 Caenorhabditis elegans
Exon264479   103   X: 16597633-16597735 Caenorhabditis elegans
Exon264481   311   X: 16597785-16598095 Caenorhabditis elegans
Exon264483   88   X: 16598407-16598494 Caenorhabditis elegans
Exon264485   89   X: 16599228-16599316 Caenorhabditis elegans
Exon264487   99   X: 16599680-16599778 Caenorhabditis elegans
Exon264489   60   X: 16599829-16599888 Caenorhabditis elegans
Exon264491   135   X: 16600328-16600462 Caenorhabditis elegans
Exon264493   179   X: 16600509-16600687 Caenorhabditis elegans
Exon264495   118   X: 16600740-16600857 Caenorhabditis elegans
Exon264497   224   X: 16600910-16601133 Caenorhabditis elegans
Exon264500   450   X: 16601783-16602232 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier 		Start End Strand
Transcript:F59C12.1a.1 16595238 16602232 1

1 Sequence

Length
2194

1 Sequence Ontology Term

Identifier Name Description
transcript