WormMine

WSWS298

An integrated data resource for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F01G12.5a.1 Sequence Name  F01G12.5a.1
Length (nt)  5715   Chromosome Location  X: 16380597-16389340
Chromosome . Primary Identifier  X Chromosome Location . Start  16380597
Chromosome Location . End  16389340 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F01G12.5a.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00002280 let-2 F01G12.5 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F01G12.5a F01G12.5a 5277   X: 16381022-16381114

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
Transcript:F01G12.5a.1 16380597 16389340 -1

2 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  

18 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon264117   518   X: 16380597-16381114 Caenorhabditis elegans
Exon264119   464   X: 16381173-16381636 Caenorhabditis elegans
Exon264121   792   X: 16381719-16382510 Caenorhabditis elegans
Exon264123   232   X: 16382564-16382795 Caenorhabditis elegans
Exon264125   815   X: 16382841-16383655 Caenorhabditis elegans
Exon264127   673   X: 16383933-16384605 Caenorhabditis elegans
Exon264129   862   X: 16384658-16385519 Caenorhabditis elegans
Exon264131   272   X: 16385567-16385838 Caenorhabditis elegans
Exon264133   165   X: 16385888-16386052 Caenorhabditis elegans
Exon264135   117   X: 16386099-16386215 Caenorhabditis elegans
Exon264138   108   X: 16386754-16386861 Caenorhabditis elegans
Exon264139   78   X: 16386982-16387059 Caenorhabditis elegans
Exon264141   176   X: 16387111-16387286 Caenorhabditis elegans
Exon264143   189   X: 16387788-16387976 Caenorhabditis elegans
Exon264147   100   X: 16388299-16388398 Caenorhabditis elegans
Exon264150   63   X: 16388773-16388835 Caenorhabditis elegans
Exon264153   55   X: 16389033-16389087 Caenorhabditis elegans
Exon264156   36   X: 16389305-16389340 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier 		Start End Strand
Transcript:F01G12.5a.1 16380597 16389340 -1

1 Sequence

Length
5715

1 Sequence Ontology Term

Identifier Name Description
transcript