WormMine

WSWS298

An integrated data resource for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F52E10.1a.1 Sequence Name  F52E10.1a.1
Length (nt)  4001   Chromosome Location  X: 16275769-16282691
Chromosome . Primary Identifier  X Chromosome Location . Start  16275769
Chromosome Location . End  16282691 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F52E10.1a.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00004745 sdc-1 F52E10.1 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F52E10.1a F52E10.1a 3606   X: 16275773-16275846

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
Transcript:F52E10.1a.1 16275769 16282691 1

2 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  

14 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon263909   78   X: 16275769-16275846 Caenorhabditis elegans
Exon263910   233   X: 16276008-16276240 Caenorhabditis elegans
Exon263912   236   X: 16276684-16276919 Caenorhabditis elegans
Exon263915   290   X: 16276967-16277256 Caenorhabditis elegans
Exon263916   331   X: 16277310-16277640 Caenorhabditis elegans
Exon263918   183   X: 16277867-16278049 Caenorhabditis elegans
Exon263920   239   X: 16278238-16278476 Caenorhabditis elegans
Exon263922   386   X: 16278634-16279019 Caenorhabditis elegans
Exon263924   134   X: 16279152-16279285 Caenorhabditis elegans
Exon263926   63   X: 16280028-16280090 Caenorhabditis elegans
Exon263928   240   X: 16280189-16280428 Caenorhabditis elegans
Exon263930   876   X: 16280657-16281532 Caenorhabditis elegans
Exon263932   133   X: 16281931-16282063 Caenorhabditis elegans
Exon263935   579   X: 16282113-16282691 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier 		Start End Strand
Transcript:F52E10.1a.1 16275769 16282691 1

1 Sequence

Length
4001

1 Sequence Ontology Term

Identifier Name Description
transcript