Genomics
1 Transcripts
| WormMine ID | Sequence Name | Length (nt) | Chromosome Location |
|---|---|---|---|
| Transcript:Y7A5A.23 | Y7A5A.23 |
281
 |
X: 15823406-15824092 |
Other
37 Allele
| Public Name |
|---|
| gk964260 |
| gk962707 |
| gk963810 |
| gk964354 |
| gk963581 |
| gk597020 |
| gk611371 |
| gk373614 |
| gk803504 |
| gk881187 |
| gk963633 |
| gk963982 |
| WBVar01929195 |
| WBVar02122488 |
| WBVar02121514 |
| WBVar02120897 |
| WBVar02122290 |
| WBVar02122884 |
| gk964295 |
| WBVar02120549 |
| WBVar02122744 |
| WBVar02123746 |
| gk304309 |
| gk304310 |
| WBVar02075442 |
| WBVar02076328 |
| WBVar00086924 |
| WBVar00086925 |
| WBVar01831107 |
| WBVar01831106 |
1 Chromosome Location
|
Feature . Primary Identifier |
Start | End | Strand |
|---|---|---|---|
| WBGene00235153 | 15823406 | 15824092 | 1 |
1 Downstream Intergenic Region
| WormBase ID | Name | Sequence Name | Length (nt) | Chromosome Location | Organism |
|---|---|---|---|---|---|
| intergenic_region_chrX_15824093..15827165 | 3073 | X: 15824093-15827165 | Caenorhabditis elegans |
2 Expression Clusters
| Regulated By Treatment | Description | Algorithm | Primary Identifier |
|---|---|---|---|
| Transcripts that showed significantly decreased expression in ogt-1(ok1474) neuronal cells isolated by FACs comparing to in FACs isolated neuronal cells from wild type. | DESeq2, fold change > 2, FDR < 0.05. | WBPaper00066485:ogt-1(ok1474)_downregulated_neuron | |
| Genes regulated by unc-39(hp701). Authors compared genes enriched in FACS sorted GFP+ cells (RID, ALA, AIY, CAN and a sheath cell) vs. whole animal in WT hpIs202[Pceh-10GFP] (WT enriched sets), and genes enriched in FACS sorted GFP+ cells (ALA, AIY, CAN and a sheath cell) vs. whole animal in unc-39(hp701) hpIs202[Pceh-10GFP] (unc-39 enriched sets) at L2 larva stage. This set of genes are WT enriched but not unc-39 enriched, suggesting they are enriched in RID neurons. | DESeq | WBPaper00050496:unc-39(hp701)_regulated |
1 Upstream Intergenic Region
| WormBase ID | Name | Sequence Name | Length (nt) | Chromosome Location | Organism |
|---|---|---|---|---|---|
| intergenic_region_chrX_15823273..15823405 | 133 | X: 15823273-15823405 | Caenorhabditis elegans |
