WormMine

WSWS298

An integrated data resource for C. elegans and related nematodes

Gene :

WormBase Gene ID  ? WBGene00304776 Gene Name  K09A9.12
Sequence Name  ? K09A9.12 Organism  Caenorhabditis elegans
Biotype  SO:0001641 Genetic Position  X:±
Length (nt)  ? 886
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
WBGene00304776

Genomics

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:K09A9.12 K09A9.12 777   X: 15599803-15600688
 

Other

0 CDSs

0 RNAi Result

24 Allele

Public Name
gk964260
gk962707
gk963810
gk963581
gk303777
gk303775
gk303776
WBVar01760801
WBVar02071493
WBVar00086643
WBVar00086644
WBVar00086641
WBVar00086642
WBVar00086645
ok235
WBVar01679807
gk602495
gk612066
gk495738
gk441948
gk637659
gk726580
gk851903
gk911469

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
WBGene00304776 15599803 15600688 1

2 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  

1 Downstream Intergenic Region

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
intergenic_region_chrX_15600689..15601066   378 X: 15600689-15601066 Caenorhabditis elegans

2 Expression Clusters

Regulated By Treatment Description Algorithm Primary Identifier
  Transcripts that showed significantly increased expression in N2 day 10 adults comparing to in N2 day 1 adult animals according to Illumina RNASeq. DESeq fold change > 2, FDR < 0.05. WBPaper00067499:Day10_vs_Day1_upregulated_Illumina
  Transcripts that showed significantly increased expression in N2 day 15 adults comparing to in N2 day 1 adult animals according to Illumina RNASeq. DESeq fold change > 2, FDR < 0.05. WBPaper00067499:Day15_vs_Day1_upregulated_Illumina

0 Expression Patterns

0 GO Annotation

0 Homologues

1 Locations


Feature . Primary Identifier
Start End Strand
WBGene00304776 15599803 15600688 1

0 Ontology Annotations

0 Regulates Expr Cluster

1 Sequence

Length
886

1 Sequence Ontology Term

Identifier Name Description
gene  

0 Strains

1 Upstream Intergenic Region

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
intergenic_region_chrX_15597178..15599802   2625 X: 15597178-15599802 Caenorhabditis elegans