WormMine

WSWS298

An integrated data resource for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:C46E1.2.1 Sequence Name  C46E1.2.1
Length (nt)  2347   Chromosome Location  X: 15479017-15485711
Chromosome . Primary Identifier  X Chromosome Location . Start  15479017
Chromosome Location . End  15485711 Method  Coding_transcript
Paste the following link
Quick Links:
SummaryGenomicsOther
 
Quick Links:
SummaryGenomicsOther
 
Lists
This MRNA isn't in any lists. Upload a list.

1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C46E1.2.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00001556 gcy-36 C46E1.2 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:C46E1.2 C46E1.2 2028   X: 15479241-15479243

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
Transcript:C46E1.2.1 15479017 15485711 1

2 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  

14 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon262534   227   X: 15479017-15479243 Caenorhabditis elegans
Exon262535   74   X: 15479293-15479366 Caenorhabditis elegans
Exon262536   101   X: 15479414-15479514 Caenorhabditis elegans
Exon262537   190   X: 15479609-15479798 Caenorhabditis elegans
Exon262538   137   X: 15479927-15480063 Caenorhabditis elegans
Exon262539   71   X: 15480479-15480549 Caenorhabditis elegans
Exon262540   167   X: 15480591-15480757 Caenorhabditis elegans
Exon262541   130   X: 15480806-15480935 Caenorhabditis elegans
Exon262542   71   X: 15480981-15481051 Caenorhabditis elegans
Exon262543   240   X: 15481099-15481338 Caenorhabditis elegans
Exon262544   146   X: 15484578-15484723 Caenorhabditis elegans
Exon262545   358   X: 15484775-15485132 Caenorhabditis elegans
Exon262546   230   X: 15485198-15485427 Caenorhabditis elegans
Exon262547   205   X: 15485507-15485711 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier 		Start End Strand
Transcript:C46E1.2.1 15479017 15485711 1

1 Sequence

Length
2347

1 Sequence Ontology Term

Identifier Name Description
transcript