WormMine

WSWS298

An integrated data resource for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F39D8.3a.1 Sequence Name  F39D8.3a.1
Length (nt)  1620   Chromosome Location  X: 15420971-15425115
Chromosome . Primary Identifier  X Chromosome Location . Start  15420971
Chromosome Location . End  15425115 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F39D8.3a.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00009561 F39D8.3 F39D8.3 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F39D8.3a F39D8.3a 1089   X: 15422525-15422628

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
Transcript:F39D8.3a.1 15420971 15425115 1

2 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  

9 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon262426   206   X: 15420971-15421176 Caenorhabditis elegans
Exon262429   121   X: 15422508-15422628 Caenorhabditis elegans
Exon262431   178   X: 15422678-15422855 Caenorhabditis elegans
Exon262434   153   X: 15422926-15423078 Caenorhabditis elegans
Exon262437   140   X: 15423122-15423261 Caenorhabditis elegans
Exon262440   182   X: 15423308-15423489 Caenorhabditis elegans
Exon262443   177   X: 15424121-15424297 Caenorhabditis elegans
Exon262447   123   X: 15424359-15424481 Caenorhabditis elegans
Exon262454   340   X: 15424776-15425115 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier 		Start End Strand
Transcript:F39D8.3a.1 15420971 15425115 1

1 Sequence

Length
1620

1 Sequence Ontology Term

Identifier Name Description
transcript