WormMine

WSWS298

An integrated data resource for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F39D8.1c.1 Sequence Name  F39D8.1c.1
Length (nt)  2775   Chromosome Location  X: 15409342-15413385
Chromosome . Primary Identifier  X Chromosome Location . Start  15409342
Chromosome Location . End  15413385 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F39D8.1c.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00004123 pqn-36 F39D8.1 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F39D8.1c F39D8.1c 2775   X: 15409342-15409397

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
Transcript:F39D8.1c.1 15409342 15413385 -1

2 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  

10 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon262328   56   X: 15409342-15409397 Caenorhabditis elegans
Exon262332   63   X: 15409454-15409516 Caenorhabditis elegans
Exon262341   67   X: 15409568-15409634 Caenorhabditis elegans
Exon262350   420   X: 15410059-15410478 Caenorhabditis elegans
Exon262363   1136   X: 15410565-15411700 Caenorhabditis elegans
Exon262376   760   X: 15411751-15412510 Caenorhabditis elegans
Exon262384   62   X: 15412565-15412626 Caenorhabditis elegans
Exon262392   107   X: 15412848-15412954 Caenorhabditis elegans
Exon262400   59   X: 15413194-15413252 Caenorhabditis elegans
Exon262406   45   X: 15413341-15413385 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier 		Start End Strand
Transcript:F39D8.1c.1 15409342 15413385 -1

1 Sequence

Length
2775

1 Sequence Ontology Term

Identifier Name Description
transcript