WormMine

WSWS298

An integrated data resource for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F39D8.1d.1 Sequence Name  F39D8.1d.1
Length (nt)  2414   Chromosome Location  X: 15409157-15415221
Chromosome . Primary Identifier  X Chromosome Location . Start  15409157
Chromosome Location . End  15415221 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F39D8.1d.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00004123 pqn-36 F39D8.1 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F39D8.1d F39D8.1d 2229   X: 15409342-15409397

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
Transcript:F39D8.1d.1 15409157 15415221 -1

2 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  

12 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon262326   241   X: 15409157-15409397 Caenorhabditis elegans
Exon262333   63   X: 15409454-15409516 Caenorhabditis elegans
Exon262342   67   X: 15409568-15409634 Caenorhabditis elegans
Exon262351   420   X: 15410059-15410478 Caenorhabditis elegans
Exon262356   92   X: 15410565-15410656 Caenorhabditis elegans
Exon262364   63   X: 15411140-15411202 Caenorhabditis elegans
Exon262369   450   X: 15411251-15411700 Caenorhabditis elegans
Exon262377   760   X: 15411751-15412510 Caenorhabditis elegans
Exon262385   62   X: 15412565-15412626 Caenorhabditis elegans
Exon262393   107   X: 15412848-15412954 Caenorhabditis elegans
Exon262401   59   X: 15413194-15413252 Caenorhabditis elegans
Exon262410   30   X: 15415192-15415221 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier 		Start End Strand
Transcript:F39D8.1d.1 15409157 15415221 -1

1 Sequence

Length
2414

1 Sequence Ontology Term

Identifier Name Description
transcript