WormMine

WSWS298

An integrated data resource for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F39D8.1a.1 Sequence Name  F39D8.1a.1
Length (nt)  3268   Chromosome Location  X: 15409148-15413621
Chromosome . Primary Identifier  X Chromosome Location . Start  15409148
Chromosome Location . End  15413621 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F39D8.1a.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00004123 pqn-36 F39D8.1 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F39D8.1a F39D8.1a 2838   X: 15409342-15409397

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
Transcript:F39D8.1a.1 15409148 15413621 -1

2 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  

10 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon262323   250   X: 15409148-15409397 Caenorhabditis elegans
Exon262335   72   X: 15409454-15409525 Caenorhabditis elegans
Exon262339   67   X: 15409568-15409634 Caenorhabditis elegans
Exon262348   420   X: 15410059-15410478 Caenorhabditis elegans
Exon262361   1136   X: 15410565-15411700 Caenorhabditis elegans
Exon262374   760   X: 15411751-15412510 Caenorhabditis elegans
Exon262382   62   X: 15412565-15412626 Caenorhabditis elegans
Exon262390   107   X: 15412848-15412954 Caenorhabditis elegans
Exon262398   113   X: 15413140-15413252 Caenorhabditis elegans
Exon262409   281   X: 15413341-15413621 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier 		Start End Strand
Transcript:F39D8.1a.1 15409148 15413621 -1

1 Sequence

Length
3268

1 Sequence Ontology Term

Identifier Name Description
transcript