WormMine

WSWS298

An integrated data resource for C. elegans and related nematodes

Gene :

WormBase Gene ID  ? WBGene00014763 Gene Name  F46F2.t1
Sequence Name  ? F46F2.t1 Organism  Caenorhabditis elegans
Automated Description  Is affected by four chemicals including metformin; Sirolimus; and rifampin based on RNA-seq studies. Biotype  SO:0000336
Genetic Position  :± Length (nt)  ? 71
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
WBGene00014763

Genomics

0 Transcripts

 

Other

0 CDSs

0 RNAi Result

11 Allele

Public Name
gk964260
gk962707
gk963810
gk963581
WBVar02123958
tm11138
WBVar02120746
WBVar02124299
WBVar02121074
WBVar02123154
WBVar02122883

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
WBGene00014763 15248973 15249043 1

2 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  

0 Downstream Intergenic Region

2 Expression Clusters

Regulated By Treatment Description Algorithm Primary Identifier
  Transcripts that showed significantly increased expression after animals were treated with 100uM Rapamycin and 50mM Metformin from day 1 to day 3 adult hermaphradite. DESeq2(v1.14.1), fold change > 2, p-value < 0.05 WBPaper00055354:Rapamycin-Metformin_upregulated
  Transcripts that showed significantly increased expression after animals were treated with 100uM Rapamycin, 50uM Rifampicin and 250uM Allantoin from day 1 to day 3 adult hermaphradite. DESeq2(v1.14.1), fold change > 2, p-value < 0.05 WBPaper00055354:Rapamycin-Rifampicin-Allantoin_upregulated

0 Expression Patterns

0 GO Annotation

0 Homologues

1 Locations


Feature . Primary Identifier 		Start End Strand
WBGene00014763 15248973 15249043 1

0 Ontology Annotations

0 Regulates Expr Cluster

1 Sequence

Length
71

1 Sequence Ontology Term

Identifier Name Description
gene  

0 Strains

1 Upstream Intergenic Region

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
intergenic_region_chrX_15246400..15248972   2573 X: 15246400-15248972 Caenorhabditis elegans