WormMine

WSWS298

An integrated data resource for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F39B1.1.1 Sequence Name  F39B1.1.1
Length (nt)  5290   Chromosome Location  X: 15234690-15246399
Chromosome . Primary Identifier  X Chromosome Location . Start  15234690
Chromosome Location . End  15246399 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F39B1.1.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00009552 piki-1 F39B1.1 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F39B1.1 F39B1.1 4824   X: 15235122-15235319

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
Transcript:F39B1.1.1 15234690 15246399 -1

2 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  

23 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon261983   630   X: 15234690-15235319 Caenorhabditis elegans
Exon261984   146   X: 15235396-15235541 Caenorhabditis elegans
Exon261985   151   X: 15235596-15235746 Caenorhabditis elegans
Exon261993   136   X: 15237608-15237743 Caenorhabditis elegans
Exon261994   101   X: 15237794-15237894 Caenorhabditis elegans
Exon261995   76   X: 15237945-15238020 Caenorhabditis elegans
Exon261996   245   X: 15238228-15238472 Caenorhabditis elegans
Exon261997   157   X: 15238524-15238680 Caenorhabditis elegans
Exon261998   437   X: 15238731-15239167 Caenorhabditis elegans
Exon261999   586   X: 15239413-15239998 Caenorhabditis elegans
Exon262000   447   X: 15240084-15240530 Caenorhabditis elegans
Exon262001   161   X: 15240577-15240737 Caenorhabditis elegans
Exon262002   449   X: 15240788-15241236 Caenorhabditis elegans
Exon262005   119   X: 15241662-15241780 Caenorhabditis elegans
Exon262006   164   X: 15241833-15241996 Caenorhabditis elegans
Exon262007   130   X: 15242262-15242391 Caenorhabditis elegans
Exon262011   229   X: 15243611-15243839 Caenorhabditis elegans
Exon262012   109   X: 15243884-15243992 Caenorhabditis elegans
Exon262013   215   X: 15244873-15245087 Caenorhabditis elegans
Exon262014   168   X: 15245294-15245461 Caenorhabditis elegans
Exon262015   206   X: 15245592-15245797 Caenorhabditis elegans
Exon262016   150   X: 15246072-15246221 Caenorhabditis elegans
Exon262017   78   X: 15246322-15246399 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier 		Start End Strand
Transcript:F39B1.1.1 15234690 15246399 -1

1 Sequence

Length
5290

1 Sequence Ontology Term

Identifier Name Description
transcript