WormMine

WSWS298

An integrated data resource for C. elegans and related nematodes

Gene :

WormBase Gene ID  ? WBGene00304794 Gene Name  H40L08.9
Sequence Name  ? H40L08.9 Organism  Caenorhabditis elegans
Automated Description  Is affected by sir-2.1 based on microarray studies. Biotype  SO:0001217
Genetic Position  X:± Length (nt)  ? 414
Paste the following link
Quick Links:
SummaryGenomicsOther
 
Quick Links:
SummaryGenomicsOther
 
Lists
This Gene is in one list:
metrics_list_union (10192)

1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
WBGene00304794

Genomics

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:H40L08.9.1 H40L08.9.1 318   X: 15076067-15076480
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:H40L08.9 H40L08.9 318   X: 15076067-15076138

2 RNAi Result

WormBase ID
WBRNAi00016350
WBRNAi00081694

18 Allele

Public Name
gk964260
gk964029
gk962707
gk964028
gk963810
gk963581
WBVar01928767
gk931887
WBVar02035074
gk962880
gk302551
gk302550
gk302553
gk302552
gk801103
gk673701
gk932396
gk687441

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
WBGene00304794 15076067 15076480 -1

2 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  

0 Downstream Intergenic Region

3 Expression Clusters

Regulated By Treatment Description Algorithm Primary Identifier
  Genome-wide analysis of developmental and sex-regulated gene expression profile. self-organizing map cgc4489_group_18
  Proteins identified in extracellular vesicle. N.A. WBPaper00062669:extracellular-vesicle_protein
  Genes found to be regulated by low-copy overexpression of sir-2.1 with p < 0.014. N.A. WBPaper00026929:sir-2.1_overexpression_regulated

0 Expression Patterns

0 GO Annotation

0 Homologues

1 Locations


Feature . Primary Identifier 		Start End Strand
WBGene00304794 15076067 15076480 -1

0 Ontology Annotations

0 Regulates Expr Cluster

1 Sequence

Length
414

1 Sequence Ontology Term

Identifier Name Description
gene  

0 Strains

1 Upstream Intergenic Region

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
intergenic_region_chrX_15076481..15076689   209 X: 15076481-15076689 Caenorhabditis elegans