WormMine

WSWS298

An integrated data resource for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F42D1.3.1 Sequence Name  F42D1.3.1
Length (nt)  1526   Chromosome Location  X: 14800120-14804357
Chromosome . Primary Identifier  X Chromosome Location . Start  14800120
Chromosome Location . End  14804357 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F42D1.3.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00009629 sprr-2 F42D1.3 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F42D1.3 F42D1.3 1356   X: 14800168-14800255

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
Transcript:F42D1.3.1 14800120 14804357 1

2 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  

11 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon261087   136   X: 14800120-14800255 Caenorhabditis elegans
Exon261088   101   X: 14801159-14801259 Caenorhabditis elegans
Exon261091   173   X: 14801304-14801476 Caenorhabditis elegans
Exon261094   126   X: 14801522-14801647 Caenorhabditis elegans
Exon261097   82   X: 14802083-14802164 Caenorhabditis elegans
Exon261100   98   X: 14802214-14802311 Caenorhabditis elegans
Exon261103   183   X: 14802889-14803071 Caenorhabditis elegans
Exon261106   85   X: 14803190-14803274 Caenorhabditis elegans
Exon261109   129   X: 14803321-14803449 Caenorhabditis elegans
Exon261112   80   X: 14803495-14803574 Caenorhabditis elegans
Exon261115   333   X: 14804025-14804357 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier 		Start End Strand
Transcript:F42D1.3.1 14800120 14804357 1

1 Sequence

Length
1526

1 Sequence Ontology Term

Identifier Name Description
transcript