WormMine

WSWS298

An integrated data resource for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:C05G5.2a.1 Sequence Name  C05G5.2a.1
Length (nt)  2189   Chromosome Location  X: 14747303-14750442
Chromosome . Primary Identifier  X Chromosome Location . Start  14747303
Chromosome Location . End  14750442 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C05G5.2a.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00007348 wshc-2 C05G5.2 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:C05G5.2a C05G5.2a 2058   X: 14747340-14747402

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
Transcript:C05G5.2a.1 14747303 14750442 1

2 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  

10 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon260970   100   X: 14747303-14747402 Caenorhabditis elegans
Exon260971   165   X: 14747456-14747620 Caenorhabditis elegans
Exon260973   135   X: 14747717-14747851 Caenorhabditis elegans
Exon260975   247   X: 14747901-14748147 Caenorhabditis elegans
Exon260977   482   X: 14748597-14749078 Caenorhabditis elegans
Exon260979   252   X: 14749128-14749379 Caenorhabditis elegans
Exon260981   237   X: 14749494-14749730 Caenorhabditis elegans
Exon260983   186   X: 14749776-14749961 Caenorhabditis elegans
Exon260986   225   X: 14750014-14750238 Caenorhabditis elegans
Exon260988   160   X: 14750283-14750442 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier 		Start End Strand
Transcript:C05G5.2a.1 14747303 14750442 1

1 Sequence

Length
2189

1 Sequence Ontology Term

Identifier Name Description
transcript