WormMine

WSWS298

An integrated data resource for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F54E4.1e.1 Sequence Name  F54E4.1e.1
Length (nt)  9090   Chromosome Location  X: 14611403-14624260
Chromosome . Primary Identifier  X Chromosome Location . Start  14611403
Chromosome Location . End  14624260 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F54E4.1e.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00004313 rbc-1 F54E4.1 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F54E4.1e F54E4.1e 9090   X: 14611403-14611489

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
Transcript:F54E4.1e.1 14611403 14624260 1

2 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  

33 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon260349   87   X: 14611403-14611489 Caenorhabditis elegans
Exon260356   204   X: 14611539-14611742 Caenorhabditis elegans
Exon260364   195   X: 14611897-14612091 Caenorhabditis elegans
Exon260372   461   X: 14612147-14612607 Caenorhabditis elegans
Exon260380   293   X: 14612898-14613190 Caenorhabditis elegans
Exon260388   131   X: 14613250-14613380 Caenorhabditis elegans
Exon260396   483   X: 14613431-14613913 Caenorhabditis elegans
Exon260404   386   X: 14614057-14614442 Caenorhabditis elegans
Exon260410   324   X: 14614487-14614810 Caenorhabditis elegans
Exon260420   59   X: 14614858-14614916 Caenorhabditis elegans
Exon260428   538   X: 14614966-14615503 Caenorhabditis elegans
Exon260438   101   X: 14615551-14615651 Caenorhabditis elegans
Exon260444   90   X: 14615874-14615963 Caenorhabditis elegans
Exon260452   101   X: 14616015-14616115 Caenorhabditis elegans
Exon260460   302   X: 14616161-14616462 Caenorhabditis elegans
Exon260468   135   X: 14616522-14616656 Caenorhabditis elegans
Exon260476   424   X: 14616704-14617127 Caenorhabditis elegans
Exon260484   316   X: 14617187-14617502 Caenorhabditis elegans
Exon260492   350   X: 14617691-14618040 Caenorhabditis elegans
Exon260500   371   X: 14618089-14618459 Caenorhabditis elegans
Exon260508   829   X: 14618507-14619335 Caenorhabditis elegans
Exon260516   349   X: 14619890-14620238 Caenorhabditis elegans
Exon260524   173   X: 14620281-14620453 Caenorhabditis elegans
Exon260532   409   X: 14620504-14620912 Caenorhabditis elegans
Exon260540   414   X: 14620959-14621372 Caenorhabditis elegans
Exon260548   166   X: 14621664-14621829 Caenorhabditis elegans
Exon260556   154   X: 14621877-14622030 Caenorhabditis elegans
Exon260564   240   X: 14622088-14622327 Caenorhabditis elegans
Exon260572   99   X: 14622375-14622473 Caenorhabditis elegans
Exon260578   45   X: 14622571-14622615 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier 		Start End Strand
Transcript:F54E4.1e.1 14611403 14624260 1

1 Sequence

Length
9090

1 Sequence Ontology Term

Identifier Name Description
transcript