WormMine

WSWS298

An integrated data resource for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F48F7.2.1 Sequence Name  F48F7.2.1
Length (nt)  1314   Chromosome Location  X: 13960149-13962830
Chromosome . Primary Identifier  X Chromosome Location . Start  13960149
Chromosome Location . End  13962830 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F48F7.2.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00006372 syx-2 F48F7.2 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F48F7.2 F48F7.2 900   X: 13960167-13960193

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
Transcript:F48F7.2.1 13960149 13962830 1

2 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  

8 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon258951   45   X: 13960149-13960193 Caenorhabditis elegans
Exon258952   87   X: 13960625-13960711 Caenorhabditis elegans
Exon258953   102   X: 13960786-13960887 Caenorhabditis elegans
Exon258954   100   X: 13960937-13961036 Caenorhabditis elegans
Exon258955   212   X: 13961499-13961710 Caenorhabditis elegans
Exon258956   153   X: 13961756-13961908 Caenorhabditis elegans
Exon258957   117   X: 13961956-13962072 Caenorhabditis elegans
Exon258958   498   X: 13962333-13962830 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier 		Start End Strand
Transcript:F48F7.2.1 13960149 13962830 1

1 Sequence

Length
1314

1 Sequence Ontology Term

Identifier Name Description
transcript