WormMine

WSWS298

An integrated data resource for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F48F7.1a.2 Sequence Name  F48F7.1a.2
Length (nt)  5005   Chromosome Location  X: 13949110-13956261
Chromosome . Primary Identifier  X Chromosome Location . Start  13949110
Chromosome Location . End  13956261 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F48F7.1a.2

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00000105 alg-1 F48F7.1 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F48F7.1a F48F7.1a 3009   X: 13951291-13951500

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
Transcript:F48F7.1a.2 13949110 13956261 1

2 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  

7 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon258924   413   X: 13949110-13949522 Caenorhabditis elegans
Exon258928   239   X: 13951262-13951500 Caenorhabditis elegans
Exon258932   173   X: 13951603-13951775 Caenorhabditis elegans
Exon258936   171   X: 13951922-13952092 Caenorhabditis elegans
Exon258940   1463   X: 13952146-13953608 Caenorhabditis elegans
Exon258944   953   X: 13953664-13954616 Caenorhabditis elegans
Exon258949   1593   X: 13954669-13956261 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier 		Start End Strand
Transcript:F48F7.1a.2 13949110 13956261 1

1 Sequence

Length
5005

1 Sequence Ontology Term

Identifier Name Description
transcript