WormMine

WSWS298

An integrated data resource for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:K11E4.4a.1 Sequence Name  K11E4.4a.1
Length (nt)  2936   Chromosome Location  X: 13727293-13734407
Chromosome . Primary Identifier  X Chromosome Location . Start  13727293
Chromosome Location . End  13734407 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
K11E4.4a.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00010776 pix-1 K11E4.4 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:K11E4.4a K11E4.4a 1941   X: 13727302-13727373

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
Transcript:K11E4.4a.1 13727293 13734407 1

2 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  

15 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon258346   81   X: 13727293-13727373 Caenorhabditis elegans
Exon258348   127   X: 13727484-13727610 Caenorhabditis elegans
Exon258350   45   X: 13727655-13727699 Caenorhabditis elegans
Exon258352   136   X: 13727752-13727887 Caenorhabditis elegans
Exon258354   96   X: 13728281-13728376 Caenorhabditis elegans
Exon258356   123   X: 13728421-13728543 Caenorhabditis elegans
Exon258358   130   X: 13728598-13728727 Caenorhabditis elegans
Exon258360   60   X: 13728971-13729030 Caenorhabditis elegans
Exon258362   155   X: 13729119-13729273 Caenorhabditis elegans
Exon258364   131   X: 13729321-13729451 Caenorhabditis elegans
Exon258366   274   X: 13729518-13729791 Caenorhabditis elegans
Exon258374   113   X: 13731311-13731423 Caenorhabditis elegans
Exon258375   277   X: 13731497-13731773 Caenorhabditis elegans
Exon258376   76   X: 13733157-13733232 Caenorhabditis elegans
Exon258377   1112   X: 13733296-13734407 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier 		Start End Strand
Transcript:K11E4.4a.1 13727293 13734407 1

1 Sequence

Length
2936

1 Sequence Ontology Term

Identifier Name Description
transcript