WormMine

WSWS298

An integrated data resource for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:K11E4.2a.1 Sequence Name  K11E4.2a.1
Length (nt)  1128   Chromosome Location  X: 13717536-13719351
Chromosome . Primary Identifier  X Chromosome Location . Start  13717536
Chromosome Location . End  13719351 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
K11E4.2a.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00010774 shc-3 K11E4.2 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:K11E4.2a K11E4.2a 819   X: 13717639-13717728

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
Transcript:K11E4.2a.1 13717536 13719351 1

2 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  

7 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon258319   193   X: 13717536-13717728 Caenorhabditis elegans
Exon258321   71   X: 13717845-13717915 Caenorhabditis elegans
Exon258322   67   X: 13717960-13718026 Caenorhabditis elegans
Exon258323   153   X: 13718074-13718226 Caenorhabditis elegans
Exon258324   168   X: 13718618-13718785 Caenorhabditis elegans
Exon258326   113   X: 13718829-13718941 Caenorhabditis elegans
Exon258329   363   X: 13718989-13719351 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier 		Start End Strand
Transcript:K11E4.2a.1 13717536 13719351 1

1 Sequence

Length
1128

1 Sequence Ontology Term

Identifier Name Description
transcript