WormMine

WSWS298

An integrated data resource for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:C40C9.2.1 Sequence Name  C40C9.2.1
Length (nt)  1944   Chromosome Location  X: 13642313-13646898
Chromosome . Primary Identifier  X Chromosome Location . Start  13642313
Chromosome Location . End  13646898 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C40C9.2.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00000048 acr-9 C40C9.2 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:C40C9.2 C40C9.2 1605   X: 13642522-13642653

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
Transcript:C40C9.2.1 13642313 13646898 -1

2 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  

13 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon258163   341   X: 13642313-13642653 Caenorhabditis elegans
Exon258164   107   X: 13642702-13642808 Caenorhabditis elegans
Exon258165   102   X: 13642857-13642958 Caenorhabditis elegans
Exon258166   238   X: 13643416-13643653 Caenorhabditis elegans
Exon258167   110   X: 13643700-13643809 Caenorhabditis elegans
Exon258168   87   X: 13643857-13643943 Caenorhabditis elegans
Exon258169   93   X: 13643994-13644086 Caenorhabditis elegans
Exon258170   96   X: 13644131-13644226 Caenorhabditis elegans
Exon258172   127   X: 13644843-13644969 Caenorhabditis elegans
Exon258174   151   X: 13645296-13645446 Caenorhabditis elegans
Exon258175   161   X: 13645927-13646087 Caenorhabditis elegans
Exon258176   174   X: 13646137-13646310 Caenorhabditis elegans
Exon258177   157   X: 13646742-13646898 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier 		Start End Strand
Transcript:C40C9.2.1 13642313 13646898 -1

1 Sequence

Length
1944

1 Sequence Ontology Term

Identifier Name Description
transcript