WormMine

WSWS298

An integrated data resource for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:C40C9.5i.1 Sequence Name  C40C9.5i.1
Length (nt)  1278   Chromosome Location  X: 13625690-13628958
Chromosome . Primary Identifier  X Chromosome Location . Start  13625690
Chromosome Location . End  13628958 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C40C9.5i.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00006412 nlg-1 C40C9.5 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:C40C9.5i C40C9.5i 1278   X: 13625690-13625744

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
Transcript:C40C9.5i.1 13625690 13628958 -1

2 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  

8 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon258030   55   X: 13625690-13625744 Caenorhabditis elegans
Exon258041   110   X: 13625788-13625897 Caenorhabditis elegans
Exon258051   105   X: 13626916-13627020 Caenorhabditis elegans
Exon258060   143   X: 13627183-13627325 Caenorhabditis elegans
Exon258069   261   X: 13627816-13628076 Caenorhabditis elegans
Exon258078   326   X: 13628141-13628466 Caenorhabditis elegans
Exon258087   128   X: 13628518-13628645 Caenorhabditis elegans
Exon258089   150   X: 13628809-13628958 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier 		Start End Strand
Transcript:C40C9.5i.1 13625690 13628958 -1

1 Sequence

Length
1278

1 Sequence Ontology Term

Identifier Name Description
transcript