WormMine

WSWS298

An integrated data resource for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F54B11.4b.1 Sequence Name  F54B11.4b.1
Length (nt)  558   Chromosome Location  X: 13592667-13593610
Chromosome . Primary Identifier  X Chromosome Location . Start  13592667
Chromosome Location . End  13593610 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F54B11.4b.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00010027 pugs-3 F54B11.4 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F54B11.4b F54B11.4b 558   X: 13592667-13592754

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
Transcript:F54B11.4b.1 13592667 13593610 1

2 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  

5 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon257984   88   X: 13592667-13592754 Caenorhabditis elegans
Exon257985   222   X: 13592911-13593132 Caenorhabditis elegans
Exon257988   83   X: 13593272-13593354 Caenorhabditis elegans
Exon257990   116   X: 13593400-13593515 Caenorhabditis elegans
Exon257992   49   X: 13593562-13593610 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier 		Start End Strand
Transcript:F54B11.4b.1 13592667 13593610 1

1 Sequence

Length
558

1 Sequence Ontology Term

Identifier Name Description
transcript