WormMine

WSWS298

An integrated data resource for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F54B11.11.1 Sequence Name  F54B11.11.1
Length (nt)  1875   Chromosome Location  X: 13578783-13581555
Chromosome . Primary Identifier  X Chromosome Location . Start  13578783
Chromosome Location . End  13581555 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F54B11.11.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00010034 F54B11.11 F54B11.11 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F54B11.11 F54B11.11 1767   X: 13578813-13578876

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
Transcript:F54B11.11.1 13578783 13581555 1

2 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  

9 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon257950   94   X: 13578783-13578876 Caenorhabditis elegans
Exon257951   104   X: 13578935-13579038 Caenorhabditis elegans
Exon257952   101   X: 13579089-13579189 Caenorhabditis elegans
Exon257953   122   X: 13579238-13579359 Caenorhabditis elegans
Exon257954   95   X: 13579685-13579779 Caenorhabditis elegans
Exon257955   238   X: 13579871-13580108 Caenorhabditis elegans
Exon257956   232   X: 13580156-13580387 Caenorhabditis elegans
Exon257957   333   X: 13580618-13580950 Caenorhabditis elegans
Exon257958   556   X: 13581000-13581555 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier 		Start End Strand
Transcript:F54B11.11.1 13578783 13581555 1

1 Sequence

Length
1875

1 Sequence Ontology Term

Identifier Name Description
transcript