WormMine

WSWS298

An integrated data resource for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F48C11.1.1 Sequence Name  F48C11.1.1
Length (nt)  1564   Chromosome Location  X: 13191212-13194390
Chromosome . Primary Identifier  X Chromosome Location . Start  13191212
Chromosome Location . End  13194390 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F48C11.1.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00001668 gpa-6 F48C11.1 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F48C11.1 F48C11.1 1095   X: 13191246-13191293

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
Transcript:F48C11.1.1 13191212 13194390 1

2 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  

9 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon257168   82   X: 13191212-13191293 Caenorhabditis elegans
Exon257169   137   X: 13191347-13191483 Caenorhabditis elegans
Exon257170   139   X: 13191699-13191837 Caenorhabditis elegans
Exon257171   170   X: 13191894-13192063 Caenorhabditis elegans
Exon257172   129   X: 13192111-13192239 Caenorhabditis elegans
Exon257173   130   X: 13193005-13193134 Caenorhabditis elegans
Exon257174   154   X: 13193182-13193335 Caenorhabditis elegans
Exon257175   122   X: 13193381-13193502 Caenorhabditis elegans
Exon257176   501   X: 13193890-13194390 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier 		Start End Strand
Transcript:F48C11.1.1 13191212 13194390 1

1 Sequence

Length
1564

1 Sequence Ontology Term

Identifier Name Description
transcript