WormMine

WSWS298

An integrated data resource for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F48C11.2a.1 Sequence Name  F48C11.2a.1
Length (nt)  2389   Chromosome Location  X: 13182114-13189961
Chromosome . Primary Identifier  X Chromosome Location . Start  13182114
Chromosome Location . End  13189961 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F48C11.2a.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00009844 cwp-5 F48C11.2 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F48C11.2a F48C11.2a 2040   X: 13182463-13182540

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
Transcript:F48C11.2a.1 13182114 13189961 -1

2 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  

12 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon257144   427   X: 13182114-13182540 Caenorhabditis elegans
Exon257146   190   X: 13183248-13183437 Caenorhabditis elegans
Exon257148   72   X: 13183498-13183569 Caenorhabditis elegans
Exon257151   87   X: 13183613-13183699 Caenorhabditis elegans
Exon257153   54   X: 13183767-13183820 Caenorhabditis elegans
Exon257155   403   X: 13183881-13184283 Caenorhabditis elegans
Exon257157   99   X: 13184478-13184576 Caenorhabditis elegans
Exon257159   134   X: 13184714-13184847 Caenorhabditis elegans
Exon257161   469   X: 13184975-13185443 Caenorhabditis elegans
Exon257163   100   X: 13185501-13185600 Caenorhabditis elegans
Exon257166   311   X: 13186113-13186423 Caenorhabditis elegans
Exon257167   43   X: 13189919-13189961 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier 		Start End Strand
Transcript:F48C11.2a.1 13182114 13189961 -1

1 Sequence

Length
2389

1 Sequence Ontology Term

Identifier Name Description
transcript