WormMine

WSWS298

An integrated data resource for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F09A5.2a.1 Sequence Name  F09A5.2a.1
Length (nt)  2850   Chromosome Location  X: 13135107-13139787
Chromosome . Primary Identifier  X Chromosome Location . Start  13135107
Chromosome Location . End  13139787 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F09A5.2a.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00008599 F09A5.2 F09A5.2 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F09A5.2a F09A5.2a 2595   X: 13135107-13135310

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
Transcript:F09A5.2a.1 13135107 13139787 1

2 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  

17 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon257034   204   X: 13135107-13135310 Caenorhabditis elegans
Exon257036   30   X: 13135357-13135386 Caenorhabditis elegans
Exon257038   36   X: 13135456-13135491 Caenorhabditis elegans
Exon257040   24   X: 13135541-13135564 Caenorhabditis elegans
Exon257042   88   X: 13135925-13136012 Caenorhabditis elegans
Exon257044   113   X: 13136304-13136416 Caenorhabditis elegans
Exon257046   90   X: 13136781-13136870 Caenorhabditis elegans
Exon257048   117   X: 13136914-13137030 Caenorhabditis elegans
Exon257050   193   X: 13137073-13137265 Caenorhabditis elegans
Exon257052   156   X: 13137315-13137470 Caenorhabditis elegans
Exon257055   226   X: 13137522-13137747 Caenorhabditis elegans
Exon257056   75   X: 13137797-13137871 Caenorhabditis elegans
Exon257058   391   X: 13137962-13138352 Caenorhabditis elegans
Exon257060   171   X: 13138490-13138660 Caenorhabditis elegans
Exon257062   266   X: 13138715-13138980 Caenorhabditis elegans
Exon257064   175   X: 13139037-13139211 Caenorhabditis elegans
Exon257067   495   X: 13139293-13139787 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier 		Start End Strand
Transcript:F09A5.2a.1 13135107 13139787 1

1 Sequence

Length
2850

1 Sequence Ontology Term

Identifier Name Description
transcript