WormMine

WSWS298

An integrated data resource for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F11C1.6a.1 Sequence Name  F11C1.6a.1
Length (nt)  2570   Chromosome Location  X: 13008493-13013962
Chromosome . Primary Identifier  X Chromosome Location . Start  13008493
Chromosome Location . End  13013962 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F11C1.6a.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00003623 nhr-25 F11C1.6 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F11C1.6a F11C1.6a 1719   X: 13008892-13009008

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
Transcript:F11C1.6a.1 13008493 13013962 1

2 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  

11 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon256698   96   X: 13008493-13008588 Caenorhabditis elegans
Exon256699   123   X: 13008886-13009008 Caenorhabditis elegans
Exon256702   33   X: 13009266-13009298 Caenorhabditis elegans
Exon256705   109   X: 13009391-13009499 Caenorhabditis elegans
Exon256710   184   X: 13010339-13010522 Caenorhabditis elegans
Exon256713   125   X: 13010573-13010697 Caenorhabditis elegans
Exon256716   288   X: 13010747-13011034 Caenorhabditis elegans
Exon256719   275   X: 13011150-13011424 Caenorhabditis elegans
Exon256722   119   X: 13011751-13011869 Caenorhabditis elegans
Exon256725   246   X: 13012328-13012573 Caenorhabditis elegans
Exon256728   972   X: 13012991-13013962 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier 		Start End Strand
Transcript:F11C1.6a.1 13008493 13013962 1

1 Sequence

Length
2570

1 Sequence Ontology Term

Identifier Name Description
transcript