WormMine

WSWS298

An integrated data resource for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F11C1.5a.1 Sequence Name  F11C1.5a.1
Length (nt)  5499   Chromosome Location  X: 12991476-12999632
Chromosome . Primary Identifier  X Chromosome Location . Start  12991476
Chromosome Location . End  12999632 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F11C1.5a.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00008694 vwa-8 F11C1.5 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F11C1.5a F11C1.5a 5415   X: 12991499-12991559

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
Transcript:F11C1.5a.1 12991476 12999632 1

2 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  

28 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon256629   84   X: 12991476-12991559 Caenorhabditis elegans
Exon256631   230   X: 12991607-12991836 Caenorhabditis elegans
Exon256634   111   X: 12992168-12992278 Caenorhabditis elegans
Exon256637   486   X: 12992326-12992811 Caenorhabditis elegans
Exon256640   117   X: 12992891-12993007 Caenorhabditis elegans
Exon256643   569   X: 12993055-12993623 Caenorhabditis elegans
Exon256646   238   X: 12994048-12994285 Caenorhabditis elegans
Exon256649   443   X: 12994341-12994783 Caenorhabditis elegans
Exon256652   100   X: 12994828-12994927 Caenorhabditis elegans
Exon256655   217   X: 12995080-12995296 Caenorhabditis elegans
Exon256658   230   X: 12995344-12995573 Caenorhabditis elegans
Exon256661   118   X: 12995627-12995744 Caenorhabditis elegans
Exon256664   353   X: 12995856-12996208 Caenorhabditis elegans
Exon256666   111   X: 12996555-12996665 Caenorhabditis elegans
Exon256668   88   X: 12996709-12996796 Caenorhabditis elegans
Exon256670   70   X: 12996841-12996910 Caenorhabditis elegans
Exon256672   127   X: 12996955-12997081 Caenorhabditis elegans
Exon256674   159   X: 12997131-12997289 Caenorhabditis elegans
Exon256676   181   X: 12997340-12997520 Caenorhabditis elegans
Exon256678   106   X: 12997741-12997846 Caenorhabditis elegans
Exon256680   246   X: 12997891-12998136 Caenorhabditis elegans
Exon256682   220   X: 12998184-12998403 Caenorhabditis elegans
Exon256684   102   X: 12998448-12998549 Caenorhabditis elegans
Exon256686   101   X: 12998595-12998695 Caenorhabditis elegans
Exon256688   184   X: 12998746-12998929 Caenorhabditis elegans
Exon256690   120   X: 12999013-12999132 Caenorhabditis elegans
Exon256692   122   X: 12999184-12999305 Caenorhabditis elegans
Exon256694   266   X: 12999367-12999632 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier 		Start End Strand
Transcript:F11C1.5a.1 12991476 12999632 1

1 Sequence

Length
5499

1 Sequence Ontology Term

Identifier Name Description
transcript