WormMine

WSWS298

An integrated data resource for C. elegans and related nematodes

Gene :

WormBase Gene ID  ? WBGene00200058 Gene Name  K02A4.9
Sequence Name  ? K02A4.9 Organism  Caenorhabditis elegans
Automated Description  Is affected by daf-2 based on RNA-seq and microarray studies. Biotype  SO:0001263
Genetic Position  :± Length (nt)  ? 98
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
WBGene00200058

Genomics

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:K02A4.9 K02A4.9 98   X: 12889933-12890030
 

Other

0 CDSs

0 RNAi Result

7 Allele

Public Name
gk964260
gk964029
gk962707
gk964028
gk963810
gk963581
gk733992

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
WBGene00200058 12889933 12890030 -1

2 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  

1 Downstream Intergenic Region

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
intergenic_region_chrX_12884990..12889932   4943 X: 12884990-12889932 Caenorhabditis elegans

2 Expression Clusters

Regulated By Treatment Description Algorithm Primary Identifier
  Transcripts that showed significantly increased expression in daf-2(e1370) comparing to in N2. Student's t-test, fold change > 2, p-value < 0.05. WBPaper00055386:daf-2(e1370)_upregulated
  mRNAs that showed significantly decreased expression in monosomal fractions in N2 comparing to in daf-2(e1370), according to RNAseq study. Differentially expressed genes were determined using cuffdiff across all pairs. WBPaper00046337:monosomal_N2_vs_daf-2_downregulated

0 Expression Patterns

0 GO Annotation

0 Homologues

1 Locations


Feature . Primary Identifier 		Start End Strand
WBGene00200058 12889933 12890030 -1

0 Ontology Annotations

0 Regulates Expr Cluster

1 Sequence

Length
98

1 Sequence Ontology Term

Identifier Name Description
gene  

0 Strains

1 Upstream Intergenic Region

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
intergenic_region_chrX_12890031..12890273   243 X: 12890031-12890273 Caenorhabditis elegans