Genomics
1 Transcripts
| WormMine ID | Sequence Name | Length (nt) | Chromosome Location |
|---|---|---|---|
| Transcript:T14G8.t1 | T14G8.t1 |
72
 |
X: 12854840-12854911 |
Other
1 Chromosome Location
|
Feature . Primary Identifier |
Start | End | Strand |
|---|---|---|---|
| WBGene00014519 | 12854840 | 12854911 | -1 |
1 Downstream Intergenic Region
| WormBase ID | Name | Sequence Name | Length (nt) | Chromosome Location | Organism |
|---|---|---|---|---|---|
| intergenic_region_chrX_12852602..12854839 | 2238 | X: 12852602-12854839 | Caenorhabditis elegans |
3 Expression Clusters
| Regulated By Treatment | Description | Algorithm | Primary Identifier |
|---|---|---|---|
| Diet: supplemented with milk fat-containing protein powder from L1 to day 2 adult stage. | Transcripts that showed significantly decreased expression in N2 animals fed with OP50 supplemented with milk fat-containing protein powder from L1 to day 2 adult stage. | Differential expression analysis between two conditions (three biological replicates per condition) was performed using DESeq2. Genes with p-value < 0.05 and Fold Change > 2 found by DESeq2 were assigned as differentially expressed. | WBPaper00067530:Milk-protein_downregulated |
| mRNAs that showed significantly decreased expression in monosomal fractions in N2 comparing to in daf-2(e1370), according to RNAseq study. | Differentially expressed genes were determined using cuffdiff across all pairs. | WBPaper00046337:monosomal_N2_vs_daf-2_downregulated | |
| Small RNAs (less than 200 bases long) that showed significantly increased expression in rpc-1(RNAi) animals. | DESeq2, fold change > 2, FDR < 0.05. | WBPaper00067416:rpc-1(RNAi)_upregulated_smallRNA |
1 Upstream Intergenic Region
| WormBase ID | Name | Sequence Name | Length (nt) | Chromosome Location | Organism |
|---|---|---|---|---|---|
| intergenic_region_chrX_12854912..12858000 | 3089 | X: 12854912-12858000 | Caenorhabditis elegans |
