WormMine

WSWS298

An integrated data resource for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:R09A8.3.1 Sequence Name  R09A8.3.1
Length (nt)  3107   Chromosome Location  X: 12624655-12629110
Chromosome . Primary Identifier  X Chromosome Location . Start  12624655
Chromosome Location . End  12629110 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
R09A8.3.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00006493 ivns-1 R09A8.3 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:R09A8.3 R09A8.3 2454   X: 12625241-12625359

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
Transcript:R09A8.3.1 12624655 12629110 -1

2 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  

11 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon255991   705   X: 12624655-12625359 Caenorhabditis elegans
Exon255993   101   X: 12625408-12625508 Caenorhabditis elegans
Exon255995   916   X: 12625672-12626587 Caenorhabditis elegans
Exon255997   328   X: 12626702-12627029 Caenorhabditis elegans
Exon255999   144   X: 12627114-12627257 Caenorhabditis elegans
Exon256001   128   X: 12627452-12627579 Caenorhabditis elegans
Exon256003   125   X: 12627626-12627750 Caenorhabditis elegans
Exon256005   196   X: 12628078-12628273 Caenorhabditis elegans
Exon256007   166   X: 12628323-12628488 Caenorhabditis elegans
Exon256009   138   X: 12628652-12628789 Caenorhabditis elegans
Exon256011   160   X: 12628951-12629110 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier 		Start End Strand
Transcript:R09A8.3.1 12624655 12629110 -1

1 Sequence

Length
3107

1 Sequence Ontology Term

Identifier Name Description
transcript