WormMine

WSWS298

An integrated data resource for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:C16D6.2c.1 Sequence Name  C16D6.2c.1
Length (nt)  2054   Chromosome Location  X: 12536978-12551684
Chromosome . Primary Identifier  X Chromosome Location . Start  12536978
Chromosome Location . End  12551684 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C16D6.2c.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00007635 npr-4 C16D6.2 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:C16D6.2c C16D6.2c 1197   X: 12538030-12538090

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
Transcript:C16D6.2c.1 12536978 12551684 -1

2 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  

11 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon255855   707   X: 12536978-12537684 Caenorhabditis elegans
Exon255863   98   X: 12537993-12538090 Caenorhabditis elegans
Exon255869   152   X: 12539443-12539594 Caenorhabditis elegans
Exon255875   118   X: 12539687-12539804 Caenorhabditis elegans
Exon255881   359   X: 12539860-12540218 Caenorhabditis elegans
Exon255887   120   X: 12540270-12540389 Caenorhabditis elegans
Exon255893   154   X: 12540438-12540591 Caenorhabditis elegans
Exon255899   98   X: 12540641-12540738 Caenorhabditis elegans
Exon255906   70   X: 12540790-12540859 Caenorhabditis elegans
Exon255909   133   X: 12551457-12551589 Caenorhabditis elegans
Exon255913   45   X: 12551640-12551684 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier 		Start End Strand
Transcript:C16D6.2c.1 12536978 12551684 -1

1 Sequence

Length
2054

1 Sequence Ontology Term

Identifier Name Description
transcript