WormMine

WSWS298

An integrated data resource for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:H20J18.1e.1 Sequence Name  H20J18.1e.1
Length (nt)  3539   Chromosome Location  X: 12503894-12509225
Chromosome . Primary Identifier  X Chromosome Location . Start  12503894
Chromosome Location . End  12509225 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
H20J18.1e.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00004739 scd-1 H20J18.1 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:H20J18.1e H20J18.1e 2805   X: 12504620-12504733

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
Transcript:H20J18.1e.1 12503894 12509225 -1

2 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  

11 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon255721   840   X: 12503894-12504733 Caenorhabditis elegans
Exon255733   74   X: 12505015-12505088 Caenorhabditis elegans
Exon255740   127   X: 12505146-12505272 Caenorhabditis elegans
Exon255757   108   X: 12505607-12505714 Caenorhabditis elegans
Exon255766   91   X: 12505819-12505909 Caenorhabditis elegans
Exon255779   263   X: 12506151-12506413 Caenorhabditis elegans
Exon255790   135   X: 12506643-12506777 Caenorhabditis elegans
Exon255805   134   X: 12506881-12507014 Caenorhabditis elegans
Exon255814   776   X: 12507071-12507846 Caenorhabditis elegans
Exon255826   923   X: 12507894-12508816 Caenorhabditis elegans
Exon255842   68   X: 12509158-12509225 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier 		Start End Strand
Transcript:H20J18.1e.1 12503894 12509225 -1

1 Sequence

Length
3539

1 Sequence Ontology Term

Identifier Name Description
transcript